106. Pye H, Butt MA, Reinert HW, Maruani A, Nunes JP, Marklew JS, Qurashi M, Funnell L, May A, Stamati I, Hamoudi R, Baker JR, Smith ME, Caddick S, Deonarain MP, Yahioglu G, Chudasama V, Lovat LB. (2016) A HER2 selective theranostic agent for surgical resection guidance and photodynamic therapy. Photochemical & Photobiological Sciences, 15:1227-1238. Click here to view full article in pdf
105. Sultan AA, Jerjes W, Berg K, Høgset A, Mosse CA, Hamoudi R, Hamdoon Z, Simeon C, Carnell D, Forster M, Hopper C. (2016) Disulfonated tetraphenyl chlorin (TPCS2a)-induced photochemical internalisation of bleomycin in patients with solid malignancies: a phase 1, dose-escalation, first-in-man trial. Lancet Oncology, 17:1217-1229. Click here to view full article in pdf
104. Libertini E, Heath SC, Hamoudi RA, Gut M, Ziller MJ, Herrero J, Czyz A, Ruotti V, Stunnenberg HG, Frontini M, Ouwehand WH, Meissner A, Gut IG, Beck S. (2016) Saturation analysis for whole-genome bisulfite sequencing data. Nature Biotechnology, doi: 10.1038/nbt.3524. Click here to view full article in pdf
103. Libertini E, Heath SC, Hamoudi RA, Gut M, Ziller MJ, Czyz A, Ruotti V, Stunnenberg HG, Frontini M, Ouwehand WH, Meissner A, Gut IG, Beck S. (2016) Information recovery from low coverage whole-genome bisulfite sequencing. Nature Communications, doi: 10.1038/ncomms11306. Click here to view full article in pdf
102. Jerjes W, Hamdoon Z, Hamoudi R, Al-Khawalde M, Hopper C. (2016) Gigantic vascular anomaly in a PHACE syndrome patient managed with photodynamic therapy. Photodiagnosis Photodynamic Therapy, S1572-1000(16)30077-1. Click here to view full article in pdf
101. McEwan C, Kamila S, Owen J, Nesbitt H, Callan B, Borden M, Nomikou N, Hamoudi RA, Taylor MA, Stride E, McHale AP, Callan JF. (2016) Combined sonodynamic and antimetabolite therapy for the improved treatment of pancreatic cancer using oxygen loaded microbubbles as a delivery vehicle. Biomaterials, 80:20-32. Click here to view full article in pdf
100. Ahmed A. Sultan, Joshua R. Kapp, Waseem Jerjes, Rifat Hamoudi, Simon Morley, Colin Hopper. (2016) Primary Burkitt-like lymphoma of the orbit diagnosed using ultrasound-guided core needle biopsy: A case study. Journal of Oral and Maxillofacial Surgery, Medicine, and Pathology, 28:36-40. Click here to view full article in pdf
99. Rifat Hamoudi, Joshua Kapp, Sevgi Umur and Michael Gandy. (2015) Variations in pre-analytical FFPE sample processing and bioinformatics: challenges for next generation molecular diagnostic testing in clinical pathology. Clinical Laboratory International, 16-18. Click here to view full article in pdf
98. Nadege Presneau, Daniel Baumhoer, Sam Behjati, Nischalan Pillay, Patrick Tarpey, Peter J Campbell, Gernot Jundt, Rifat Hamoudi, David C Wedge, Peter Van Loo, A Bassim Hassan, Bhavisha Khatri, Hongtao Ye, Roberto Tirabosco, M Fernanda Amary and Adrienne M Flanagan. (2015) Diagnostic value of H3F3A mutations in giant cell tumour of bone compared to osteoclast-rich mimics. The Journal of Pathology: Clinical Research, 10.1002/cjp2.13. Click here to view full article in pdf
97. Kapp,J.R., Diss,T., Spicer,J., Gandy,M., Schrijver,I., Jennings,L.J., Li,M.M., Tsongalis,G.J., de Castro,D.G., Bridge,J.A., Wallace,A., Deignan,J.L., Hing,S., Butler,R., Verghese,E., Latham,G.J., Hamoudi,R.A. (2015) Variation in pre-PCR processing of FFPE samples leads to discrepancies in BRAF and EGFR mutation detection: a diagnostic RING trial. Journal of Clinical Pathology, 68, 111-118. Click here to view full article in pdf
96. Moti,N., Malcolm,T., Hamoudi,R., Mian,S., Garland,G., Hook,C.E., Burke,G.A., Wasik,M.A., Merkel,O., Kenner,L., Laurenti,E., Dick,J.E., Turner,S.D. (2015) Anaplastic large cell lymphoma-propagating cells are detectable by side population analysis and possess an expression profile reflective of a primitive origin. Oncogene., 34, 1843-1852. Click here to view full article in pdf
95. Zhang,H., Zhang,Y., Hamoudi,R., Yan,G., Chen,X., Zhou,Y. (2014) Spatiotemporal characterizations of dengue virus in mainland China: insights into the whole genome from 1978 to 2011. PLoS One., 9, e87630. Click here to view full article in pdf
94. Luo,F., Poulogiannis,G., Ye,H., Hamoudi,R., Dong,G., Zhang,W., Ibrahim,A.E., Arends,M.J. (2014) Wild-type K-ras has a tumour suppressor effect on carcinogen-induced murine colorectal adenoma formation. International Journal of Experimental Pathology, 95, 8-15. Click here to view full article in pdf
93. Lambert,S.R., Mladkova,N., Gulati,A., Hamoudi,R., Purdie,K., Cerio,R., Leigh,I., Proby,C., Harwood,C.A. (2014) Key differences identified between actinic keratosis and cutaneous squamous cell carcinoma by transcriptome profiling. Br.J.Cancer., 110, 520-529. Click here to view full article in pdf
92. Behjati S, Tarpey PS, Presneau N, Scheipl S, Pillay N, Van Loo P, Wedge DC, Cooke SL, Gundem G, Davies H, Nik-Zainal S, Martin S, McLaren S, Goodie V, Robinson B, Butler A, Teague JW, Halai D, Khatri B, Myklebost O, Baumhoer D, Jundt G, Hamoudi R, Tirabosco R, Amary MF, Futreal PA, Stratton MR, Campbell PJ, Flanagan AM. (2013) Distinct H3F3A and H3F3B driver mutations define chondroblastoma and giant cell tumor of bone. Nature Genetics, 45, 12, 1479-1482. Click here to view full article in pdf
91. Watkins AJ, Hamoudi RA, Zeng N, Yan Q, Huang Y, Liu H, Zhang J, Braggio E, Fonseca R, de Leval L, Isaacson PG, Wotherspoon A, McPhail ED, Dogan A, Du MQ. (2012) An integrated genomic and expression analysis of 7q deletion in splenic marginal zone lymphoma. PLoS One, 7, 9, e44997. Click here to view full article in pdf
90. Li,W., Zeng,Y., Wang,J., Zhou,B., Zhang,J., Zhang,H., Li,J., Wu,Y., Hamoudi, R., Zhou,Y. (2012) Predicting sustained viral response to hepatitis C using a rapid and simple IL28B rs8099917 genotyping assay. Antiviral Research, 94, 54-56. Click here to view full article in pdf
89. Yan,Q., Huang,Y., Watkins,A.J., Kocialkowski,S., Zeng,N., Hamoudi,R.A., Isaacson,P.G., de Leval,L., Wotherspoon,A., Du,M.Q. (2012) BCR and TLR signaling pathways are recurrently targeted by genetic changes in splenic marginal zone lymphomas. Haematologica, 97, 595-598. Click here to view full article in pdf
88. Bi,Y., Zeng,N., Chanudet,E., Huang,Y., Hamoudi,R.A., Liu,H., Dong,G., Watkins,A.J., Ley,S.C., Zou,L., Chen,R., Zhu,X., Du,M.Q. (2012) A20 inactivation in ocular adnexal MALT lymphoma. Haematologica, 97, 926-930. Click here to view full article in pdf
87. Mulholland,S., Pearson,D.M., Hamoudi,R.A., Malley,D.S., Smith,C.M., Weaver,J.M., Jones,D.T., Kocialkowski,S., Backlund,L.M., Collins,V.P., Ichimura,K. (2012) MGMT CpG island is invariably methylated in adult astrocytic and oligodendroglial tumors with IDH1 or IDH2 mutations. International Journal of Cancer, 131, 1104-1113. Click here to view full article in pdf
86. Payne,K., Wright,P., Grant,J.W., Huang,Y., Hamoudi,R., Bacon,C.M., Du,M.Q., Liu,H. (2011) BIOMED-2 PCR assays for IGK gene rearrangements are essential for B-cell clonality analysis in follicular lymphoma. British Journal of Haematology, 155, 84-92. Click here to view full article in pdf
85. Luo,F., Poulogiannis,G., Ye,H., Hamoudi,R., Arends,M.J. (2011) Synergism between K-rasVal12 and mutant Apc accelerates murine large intestinal tumourigenesis. Oncology Report, 26, 125-133. Click here to view full article in pdf
84. Malley, D. S., Hamoudi, R. A., Kocialkowski, S., Pearson, D. M., Collins, V. P., Ichimura, K. (2011) A distinct region of the MGMT CpG island critical for transcriptional regulation is preferentially methylated in glioblastoma cells and xenografts. Acta Neuropatholica, 121, 651-661. Click here to view full article in pdf
83. Rosebeck, S., Madden, L., Jin, X., Gu, S., Apel, I. J., Appert, A., Hamoudi, R. A., Noels, H., Sagaert, X., Van Loo, P., Baens, M., Du, M. Q., Lucas, P. C., McAllister-Lucas, L. M. (2011) Cleavage of NIK by the API2-MALT1 fusion oncoprotein leads to noncanonical NF-kappaB activation. Science, 331, 468-472. Click here to view full article in pdf
82. Dong, G., Chanudet, E., Zeng, N., Appert, A., Chen, Y. W., Au, W. Y., Hamoudi, R., Watkins, A. J., Ye, H., Liu, H., Gao, Z., Chuang, S. S., Srivastava, G., Du, M. Q. (2011) A20, ABIN-1/2 and CARD11 mutations and their prognostic value in gastrointestinal diffuse large B-cell lymphoma. Clinical Cancer Research, 17, 1440-1451. Click here to view full article in pdf
81. Luo,F., Poulogiannis,G., Ye,H., Hamoudi,R., Zhang,W., Dong,G., Arends,M.J. (2011) Mutant K-ras promotes carcinogen-induced murine colorectal tumourigenesis, but does not alter tumour chromosome stability. Journal of Pathology, 223, 390-399. Click here to view full article in pdf
80. Luan, S. L., Boulanger, E., Ye, H., Chanudet,
E., Johnson, N., Hamoudi, R. A., Bacon, C. M., Liu, H., Huang, Y., Said,
J., Chu, P., Clemen, C. S., Cesarman, E., Chadburn, A., Isaacson, P. G., Du, M.
Q. (2010). "Primary effusion lymphoma: genomic profiling
revealed amplification of SELPLG and CORO1C encoding for proteins important for
cell migration", Journal of Pathology, vol. 222, no. 2, pp. 166-179.
79.
Hamoudi, R. A.,
Appert, A., Ye, H., Ruskone-Fourmestraux, A., Streubel, B., Chott, A., Raderer,
M., Gong, L., Wlodarska, I., Wolf-Peeters, C., Maclennan, K. A., de Leval, L.,
Isaacson, P. G., Du, M. Q. (2010). "Differential
expression of NF-kappaB target genes in MALT lymphoma with and without
chromosome translocation: insights into molecular mechanism", Leukemia,
vol. 24, no. 8, pp. 1487-1497.
78. Luo, F., Ye, H., Hamoudi, R., Dong, G.,
Zhang, W., Patek, C. E., Poulogiannis, G., Arends, M. J. (2010). "K-ras
exon 4A has a tumour suppressor effect on carcinogen-induced murine colonic
adenoma formation", Journal of Pathology, vol. 220, no. 5, pp.
542-550.
77. Watkins, A. J., Huang, Y., Ye, H., Chanudet,
E., Johnson, N., Hamoudi, R., Liu, H., Dong, G., Attygalle, A., McPhail,
E. D., Law, M. E., Isaacson, P. G., de Leval, L., Wotherspoon, A., Du, M. Q.
(2010). "Splenic marginal zone lymphoma:
characterization of 7q deletion and its value in diagnosis", Journal of
Pathology, vol. 220, no. 4, pp. 461-474.
76. Liu, H., Brais, R., Lavergne-Slove, A., Jeng,
Q., Payne, K., Ye, H., Liu, Z., Carreras, J., Huang, Y., Bacon, C. M., Hamoudi,
R. A., Save, V., Venkatraman, L., Isaacson, P. G., Woodward, J., Du, M. Q.
(2010). "Continual monitoring of intraepithelial lymphocyte
immunophenotype and clonality is more important than snapshot analysis in the
surveillance of refractory coeliac disease", Gut, vol. 59, no. 4,
pp. 452-460.
75. Poulogiannis, G., Ichimura, K., Hamoudi, R.
A., Luo, F., Leung, S. Y., Yuen, S. T., Harrison, D. J., Wyllie, A. H.,
Arends, M. J. (2010). "Prognostic relevance of DNA copy
number changes in colorectal cancer", Journal of Pathology, vol.
220, no. 3, pp. 338-347.
74. Chanudet, E., Huang, Y., Ichimura, K., Dong,
G., Hamoudi, R. A., Radford, J., Wotherspoon, A. C., Isaacson, P. G.,
Ferry, J., Du, M. Q. (2010). "A20 is targeted by promoter methylation,
deletion and inactivating mutation in MALT lymphoma", Leukemia,
vol. 24, no. 2, pp. 483-487.
73. Luo, F., Brooks, D. G., Ye, H., Hamoudi, R.,
Poulogiannis, G., Patek, C. E., Winton, D. J., Arends, M. J. (2009).
"Mutated K-ras(Asp12) promotes tumourigenesis in Apc(Min) mice more in the
large than the small intestines, with synergistic effects between K-ras and Wnt
pathways", International Journal of Experimental Pathology, vol.
90, no. 5, pp. 558-574.
72. Youssif, C., Goldenbogen, J., Hamoudi, R.,
Carreras, J., Viskaduraki, M., Cui, Y. X., Bacon, C. M., Burke, G. A., Turner,
S. D. (2009). "Genomic profiling of pediatric
ALK-positive anaplastic large cell lymphoma: a Children's Cancer and Leukaemia
Group Study", Genes Chromosomes Cancer, vol. 48, no. 11, pp.
1018-1026.
71. Carreras, J., Lopez-Guillermo, A., Roncador,
G., Villamor, N., Colomo, L., Martinez, A., Hamoudi, R., Howat, W. J.,
Montserrat, E., Campo, E. (2009). "High numbers of tumor-infiltrating
programmed cell death 1-positive regulatory lymphocytes are associated with
improved overall survival in follicular lymphoma", Journal of Clinical
Oncology, vol. 27, no. 9, pp. 1470-1476.
70. Chanudet, E., Ye, H., Ferry, J., Bacon, C. M.,
Adam, P., Muller-Hermelink, H. K., Radford, J., Pileri, S. A., Ichimura, K.,
Collins, V. P., Hamoudi, R. A., Nicholson, A. G., Wotherspoon, A. C.,
Isaacson, P. G., Du, M. Q. (2009). "A20 deletion is associated with copy
number gain at the TNFA/B/C locus and occurs preferentially in
translocation-negative MALT lymphoma of the ocular adnexa and salivary
glands", Journal of Pathology, vol. 217, no. 3, pp. 420-430.
69. Bacon, C. M., Diss, T. C., Ye, H., Liu, H.,
Goatly, A., Hamoudi, R., Wotherspoon, A., Gascoyne, R. D., Dogan, A.,
Du, M. Q., Isaacson, P. G. (2009). "Follicular lymphoma
of the thyroid gland", American Journal of Surgical Pathology, vol.
33, no. 1, pp. 22-34.
68. Luo, F., Hamoudi, R., Brooks, D. G.,
Patek, C. E., Arends, M. J. (2007). "Stem cell gene expression
changes induced specifically by mutated K-ras", Gene Expression,
vol. 14, no. 2, pp. 101-115.
67. Zhou, Y., Attygalle, A.D., Chuang, S.S., Diss,
T., Ye, H., Liu, H., Hamoudi, R.A., Munson, P., Bacon, C.M., Dogan, A., Du,
M.Q. (2007). "Angioimmunoblastic T-cell lymphoma:
histological progression associates with EBV and HHV6B viral load", British
Journal of Haematology, vol. 138, no. 1, pp. 44-53.
66. Luo, F., Brooks, D. G., Ye, H., Hamoudi, R.,
Poulogiannis, G., Patek, C. E., Winton, D. J., Arends, M. J. (2007).
"Conditional expression of mutated K-ras accelerates intestinal
tumorigenesis in Msh2-deficient mice", Oncogene, vol. 26, no. 30,
pp. 4415-4427.
65. Shirali, S., Hamoudi, R. A., Bench, A.,
Scott, M., Ley, S. C., Du, M. Q. (2007). "TPL-2 MEK kinase is not targeted
by mutation in diffuse large B cell lymphoma and myeloid leukemia", Leukemia
Research, vol. 31, no. 11, pp. 1604-1607.
64. Zhou, Y., Ye, H., Martin-Subero, J. I., Gesk,
S., Hamoudi, R., Lu, Y. J., Wang, R., Shipley, J., Siebert, R.,
Isaacson, P. G., Dogan, A., Du, M. Q. (2007). "The
pattern of genomic gains in salivary gland MALT lymphomas", Haematologica,
vol. 92, no. 7, pp. 921-927.
63. Chanudet, E., Zhou, Y., Bacon, C. M.,
Wotherspoon, A. C., Muller-Hermelink, H. K., Adam, P., Dong, H. Y., De Jong,
D., Li, Y., Wei, R., Gong, X., Wu, Q., Ranaldi, R., Goteri, G., Pileri, S. A.,
Ye, H., Hamoudi, R. A., Liu, H., Radford, J., Du, M. Q. (2006).
"Chlamydia psittaci is variably associated with ocular adnexal MALT
lymphoma in different geographical regions", Journal of Pathology, vol. 209, no. 3, pp. 344-351.
62. Johnson, N. A., Hamoudi, R. A.,
Ichimura, K., Liu, L., Pearson, D. M., Collins, V. P., Du, M. Q. (2006). "Application of array CGH on archival formalin-fixed
paraffin-embedded tissues including small numbers of microdissected
cells", Laboratory Investigation, vol. 86, no. 9, pp. 968-978.
61. Mao, X., Hamoudi, R. A., Talbot, I. C.,
Baudis, M. (2006). "Allele-specific loss of
heterozygosity in multiple colorectal adenomas: toward an integrated molecular
cytogenetic map II", Cancer Genetics Cytogenetics, vol. 167, no. 1,
pp. 1-14.
60. Zhou, Y., Ye, H., Martin-Subero, J. I., Hamoudi,
R., Lu, Y. J., Wang, R., Siebert, R., Shipley, J., Isaacson, P. G., Dogan,
A., Du, M. Q. (2006). "Distinct comparative genomic hybridisation profiles
in gastric mucosa-associated lymphoid tissue lymphomas with and without t(11;18)(q21;q21)", British Journal of
Haematology, vol. 133, no. 1, pp. 35-42.
59. Perani, M., Antonson, P., Hamoudi, R.,
Ingram, C. J., Cooper, C. S., Garrett, M. D., Goodwin, G. H. (2005). "The
proto-oncoprotein SYT interacts with SYT-interacting protein/co-activator
activator (SIP/CoAA), a human nuclear receptor co-activator with similarity to
EWS and TLS/FUS family of proteins", Journal of Biological Chemistry,
vol. 280, no. 52, pp. 42863-42876. Click
here to view full article in pdf
58. Ye,
H., Gong, L., Liu, H., Hamoudi, R. A., Shirali, S., Ho, L., Chott, A.,
Streubel, B., Siebert, R., Gesk, S., Martin-Subero, J. I., Radford, J. A.,
Banerjee, S., Nicholson, A. G., Ranaldi, R., Remstein, E. D., Gao, Z., Zheng,
J., Isaacson, P. G., Dogan, A., Du, M. Q. (2005). "MALT lymphoma with t(14;18)(q32;q21)/IGH-MALT1 is characterized by strong
cytoplasmic MALT1 and BCL10 expression", Journal of Pathology, vol.
205, no. 3, pp. 293-301. Click
here to view full article in pdf
57. Mao,
X., Hamoudi, R. A., Zhao, P., Baudis, M. (2005). "Genetic
losses in breast cancer: toward an integrated molecular cytogenetic map", Cancer
Genetics Cytogenetics, vol. 160, no. 2, pp. 141-151. Click
here to view full article in pdf
56. Hamoudi,
R. A., El Hamidi, A., Du, M. Q. (2005). "Identification
of novel prognostic markers in cervical intraepithelial neoplasia using LDMAS
(LOH Data Management and Analysis Software)", BMC Bioinformatics,
vol. 6, no. 1, p. 18. Click
here to view full article in pdf
55.
ELhamidi, A., Hamoudi, R. A., Kocjan, G., Du, M. Q. (2004). "Cervical intraepithelial neoplasia: prognosis by combined LOH
analysis of multiple loci", Gynecological Oncology, vol. 94, no. 3,
pp. 671-679. Click
here to view full article in pdf
54. Hamoudi, R. A., Diss, T. C.,
Oksenhendler, E., Pan, L., Carbone, A., Ascoli, V., Boshoff, C., Isaacson, P.,
Du, M. Q. (2004). "Distinct cellular origins of primary
effusion lymphoma with and without EBV infection", Leukemia Research,
vol. 28, no. 4, pp. 333-338. Click
here to view full article in pdf
53.
Kadouri, L., Kote-Jarai, Z., Easton,
D. F., Hubert, A., Hamoudi, R. A., Glaser, B., Abeliovich, D., Peretz,
T., Eeles, R. A. (2004). "Polyglutamine repeat length in the AIB1
gene modifies breast cancer susceptibility in BRCA1 carriers", International
Journal of Cancer, vol. 20;108, no. 3, pp.
399-403. Click
here to view full article in pdf
52. Liu, H., Hamoudi, R. A., Ye, H.,
Ruskone-Fourmestraux, A., Dogan, A., Isaacson, P. G., Du, M. Q. (2004).
"t(11;18)(q21;q21) of mucosa-associated lymphoid tissue lymphoma results
from illegitimate non-homologous end joining following double strand
breaks", British Journal of Haematology, vol. 125, no. 3, pp.
318-329. Click
here to view full article in pdf
51. Obermann, E. C., Diss, T. C., Hamoudi, R.
A., Munson, P., Wilkins, B. S., Camozzi, M. L., Isaacson, P. G., Du, M. Q.,
Dogan, A. (2004). "Loss of heterozygosity at chromosome 9p21 is a frequent
finding in enteropathy-type T-cell lymphoma", Journal of Pathology,
vol. 202, no. 2, pp. 252-262. Click
here to view full article in pdf
50. Sieben, N. L., Macropoulos, P., Roemen, G. M.,
Kolkman-Uljee, S. M., Jan, F. G., Hamoudi, R. A., Diss, T., Warren, B.,
Al Adnani, M., De Goeij, A. P., Krausz, T., Flanagan, A. M. (2004). "In
ovarian neoplasms, BRAF, but not KRAS, mutations are restricted to low-grade
serous tumours", Journal of Pathology, vol. 202, no. 3, pp.
336-340. Click
here to view full article in pdf
49. Thornton, P. D., Gruszka-Westwood, A. M., Hamoudi,
R. A., Atkinson, S., Kaczmarek, P., Morilla, R. M., Hilditch, B. L.,
A'Hern, R., Matutes, E., Catovsky, D. (2004). "Characterisation
of TP53 abnormalities in chronic lymphocytic leukaemia", Hematology
Journal, vol. 5, no. 1, pp. 47-54. Click
here to view full article in pdf
48. Chuang, S. S., Lee, C., Hamoudi, R. A.,
Liu, H., Lee, P. S., Ye, H., Diss, T. C., Dogan, A., Isaacson, P. G., Du, M. Q.
(2003). "High frequency of t(11;18) in gastric
mucosa-associated lymphoid tissue lymphomas in Taiwan, including one patient
with high-grade transformation", British Journal of Haematology,
vol. 120, no. 1, pp. 97-100. Click
here to view full article in pdf
47. Edwards, S. M., Kote-Jarai, Z., Meitz, J., Hamoudi,
R. A., Hope, Q., Osin, P., Jackson, R., Southgate, C., Singh, R., Falconer,
A., Dearnaley, D. P., Ardern-Jones, A., Murkin, A., Dowe, A., Kelly, J.,
Williams, S., Oram, R., Stevens, M., Teare, D. M., Ponder, B. A., Gayther, S.
A., Easton, D. F., Eeles, R. A. (2003). "Two percent of
men with early-onset prostate cancer harbor germline mutations in the BRCA2
gene", American Journal of Human Genetics, vol. 72, no. 1, pp.
1-12. Click
here to view full article in pdf
46. Elnenaei, M. O., Hamoudi, R. A.,
Swansbury, J., Gruszka-Westwood, A. M., Brito-Babapulle, V., Matutes, E.,
Catovsky, D. (2003). "Delineation of the minimal region
of loss at 13q14 in multiple myeloma", Genes Chromosomes Cancer,
vol. 36, no. 1, pp. 99-106. Click
here to view full article in pdf
45.
Gruszka-Westwood, A. M., Hamoudi, R. A., Osborne, L.,
Matutes, E., Catovsky, D. (2003). "Deletion mapping on
the long arm of chromosome 7 in splenic lymphoma with villous
lymphocytes", Genes Chromosomes Cancer, vol. 36, no. 1, pp. 57-69.
Click
here to view full article in pdf
44. Edwards,S., Meitz,J., Hope,Q., Bullock,S., Hamoudi,R., Arden-Jones,A., Southgate,C., Dowe,A., Coleman,K., Dearnaley,D., Eeles,R., ACTANE Consortium. (2003). “Results of a genome-wide linkage analysis in prostate cancer families ascertained through the ACTANE consortium”. Prostate, 57, 270-279. Click here to view full article in pdf
43. Du, M. Q., Diss, T. C., Liu, H., Ye, H., Hamoudi,
R. A., Cabecadas, J., Dong, H. Y., Harris, N. L., Chan, J. K., Rees, J. W.,
Dogan, A., Isaacson, P. G. (2002). "KSHV- and
EBV-associated germinotropic lymphoproliferative disorder", Blood,
vol. 100, no. 9, pp. 3415-3418. Click
here to view full article in pdf
42. Gruszka-Westwood, A. M., Atkinson, S.,
Summersgill, B. M., Shipley, J., Elnenaei, M. O., Jain, P., Hamoudi, R. A.,
Kaeda, J. S., Wotherspoon, A. C., Matutes, E., Catovsky, D. (2002). "Unusual case of leukemic mantle cell lymphoma with amplified
CCND1/IGH fusion gene", Genes Chromosomes Cancer, vol. 33, no. 2,
pp. 206-212. Click
here to view full article in pdf
41. Hamidi, A. E., Liu, H., Zhang, Y., Hamoudi,
R. A., Kocjan, G., Du, M. Q. (2002). "Archival
cervical smears: a versatile resource for molecular investigations", Cytopathology,
vol. 13, no. 5, pp. 291-299. Click
here to view full article in pdf
40. Hamoudi, R. A., Johnston, S.,
Hutchinson, G., D'Errico, J. (2002). "High Throughput
Methods for Gene Identification, Cloning and Functional Genomics Using the
GeneTAC G3 Robotics Workstation", Journal of the Association for
Laboratory Automation, vol. 7, no. 5, pp. 53-59. Click
here to view full article in pdf
39. Kote-Jarai, Z., Durocher, F., Edwards, S. M., Hamoudi,
R. A., Jackson, R. A., Ardern-Jones, A., Murkin, A., Dearnaley, D. P.,
Kirby, R., Houlston, R., Easton, D. F., Eeles, R. (2002). "Association
between the GCG polymorphism of the selenium dependent GPX1 gene and the risk
of young onset prostate cancer", Prostate Cancer Prostatic Disease,
vol. 5, no. 3, pp. 189-192. Click
here to view full article in pdf
38. Liu, H., Ye, H., Ruskone-Fourmestraux, A., De
Jong, D., Pileri, S., Thiede, C., Lavergne, A., Boot, H., Caletti, G.,
Wundisch, T., Molina, T., Taal, B. G., Elena, S., Thomas, T., Zinzani, P. L.,
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Du, M. Q. (2002). "T(11;18) is a marker for all
stage gastric MALT lymphomas that will not respond to H. pylori
eradication", Gastroenterology, vol. 122, no. 5, pp. 1286-1294. Click
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37. Oksenhendler, E., Boulanger, E., Galicier, L.,
Du, M. Q., Dupin, N., Diss, T. C., Hamoudi, R. A., Daniel, M. T.,
Agbalika, F., Boshoff, C., Clauvel, J. P., Isaacson, P. G., Meignin, V. (2002).
"High incidence of Kaposi sarcoma-associated
herpesvirus-related non-Hodgkin lymphoma in patients with HIV infection and
multicentric Castleman disease", Blood, vol. 99, no. 7, pp.
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36. Du, M. Q., Liu, H., Diss, T. C., Ye, H., Hamoudi,
R. A., Dupin, N., Meignin, V., Oksenhendler, E., Boshoff, C., Isaacson, P.
G. (2001). "Kaposi sarcoma-associated herpesvirus infects monotypic (IgM
lambda) but polyclonal naive B cells in Castleman disease and associated
lymphoproliferative disorders", Blood, vol. 97, no. 7, pp.
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35. Gruszka-Westwood, A. M., Hamoudi, R. A.,
Matutes, E., Tuset, E., Catovsky, D. (2001). "p53
abnormalities in splenic lymphoma with villous lymphocytes", Blood,
vol. 97, no. 11, pp. 3552-3558. Click
here to view full article in pdf
34. Hamoudi, R. A., Edwards, S. M.,
Kote-Jarai, Z., Eeles, R. A. (2001). "An improved high
throughput heteroduplex mutation detection system for screening BRCA2
mutations-fluorescent mutation detection (F-MD)", Human Mutation,
vol. 17, no. 3, pp. 220-232. Click
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33. Jefferies, S., Edwards, S. M., Hamoudi, R.
A., A'Hern, R., Foulkes, W., Goldgar, D., Eeles, R. (2001). "No germline mutations in CDKN2A (p16) in patients with
squamous cell cancer of the head and neck and second primary tumours", British
Journal of Cancer, vol. 85, no. 9, pp. 1383-1386. Click
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32. Liu, H., Ye, H., Dogan, A., Ranaldi, R., Hamoudi,
R. A., Bearzi, I., Isaacson, P. G., Du, M. Q. (2001). "T(11;18)(q21;q21) is associated with advanced
mucosa-associated lymphoid tissue lymphoma that expresses nuclear BCL10", Blood,
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31. Liu, H., Ruskon-Fourmestraux, A.,
Lavergne-Slove, A., Ye, H., Molina, T., Bouhnik, Y., Hamoudi, R. A.,
Diss, T. C., Dogan, A., Megraud, F., Rambaud, J. C., Du, M. Q., Isaacson, P. G.
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mucosa-associated lymphoid tissue lymphoma to Helicobacter pylori eradication
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30. Hamoudi, R. A. (2001). "NetBookingLIMS : automation of workflow within
core genetics laboratories using novel Internet-based information management
system", Journal of the Association for Laboratory Automation, vol.
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29. Bradshaw, P. S., Houlston, R. S., Hamoudi,
R. A., Yuille, M. R. (2000). "A proposed BAT-26
germline polymorphism", American Journal of Pathology, vol. 156,
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28. Brito-Babapulle, V., Hamoudi, R. A.,
Matutes, E., Watson, S., Kaczmarek, P., Maljaie, H., Catovsky, D. (2000).
"p53 allele deletion and protein accumulation occurs
in the absence of p53 gene mutation in T-prolymphocytic leukaemia and Sezary
syndrome", British Journal of Haematology, vol. 110, no. 1, pp.
180-187. Click
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27. Callanan, M. B., Le Baccon, P., Mossuz, P.,
Duley, S., Bastard, C., Hamoudi, R. A., Dyer, M. J., Klobeck, G.,
Rimokh, R., Sotto, J. J., Leroux, D. (2000). "The IgG Fc receptor,
FcgammaRIIB, is a target for deregulation by chromosomal translocation in
malignant lymphoma", Proceedings of National Academy of Science.U.S.A,
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26. Du, M. Q., Peng, H., Liu, H., Hamoudi, R. A.,
Diss, T. C., Willis, T. G., Ye, H., Dogan, A., Wotherspoon, A. C., Dyer, M. J.,
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lymphoma", Blood, vol. 95, no. 12, pp. 3885-3890. Click
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25. Forrest, M. S., Edwards, S. M., Hamoudi, R.
A., Dearnaley, D. P., Arden-Jones, A., Dowe, A., Murkin, A., Kelly, J.,
Teare, M. D., Easton, D. F., Knowles, M. A., Bishop, D. T., Eeles, R. A.
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cancer", Journal of Medical Genetics, vol. 37, no. 3, pp. 210-212. Click
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24. Hamoudi, R. A. (2000). "Automating
the construction and maintenance of PAC & cDNA libraries.",
International Biotechnology Laboratory, vol. 18, no. 2, p. 12. Click here
to view full article in pdf
23. Liu, H., Peng, H., Hamoudi, R. A.,
Mullins, P. D., Ranaldi, R., Bearzi, I., Isaacson, P. G., Du, M. Q. (2000).
"A "G insertion" at nucleic acids 481 of the H. pylori fldA gene
is not associated with gastric MALT
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22.
Mao, X. & Hamoudi, R. A. (2000). "Molecular
and cytogenetic analysis of glioblastoma multiforme", Cancer Genetics
Cytogenetics, vol. 122, no. 2, pp. 87-92. Click
here to view full article in pdf
21. Mao, X., McGuire, S., Hamoudi, R. A.
(2000). "Molecular and cytogenetic analysis of lymphoblastoid and colon
cancer cell lines from cotton-top tamarin (Sagiunus oedipus)",
Cancer Genetics Cytogenetics, vol. 120, no. 1, pp. 6-10. Click
here to view full article in pdf
20. Rapley, E. A., Crockford, G. P., Teare, D.,
Biggs, P., Seal, S., Barfoot, R., Edwards, S., Hamoudi, R. A., Heimdal,
K., Fossa, S. D., Tucker, K., Donald, J., Collins, F., Friedlander, M., Hogg,
D., Goss, P., Heidenreich, A., Ormiston, W., Daly, P. A., Forman, D., Oliver,
T. D., Leahy, M., Huddart, R., Cooper, C. S., Bodmer, J. G., Stratton, M.R.
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for testicular germ-cell tumours", Nature Genetics, vol. 24, no. 2,
pp. 197-200. Click
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19. Bradshaw, P. S., Hamoudi, R. A., Min,
T., Catovsky, D., Houlston, R. S., Yuille, M. R. (1999). "Fluorescent
BAT-25 and BAT-26 analysis of T cell prolymphocytic leukaemia", Leukemia,
vol. 13, no. 12, pp. 2104-2106. Click
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Edwards, S. M., Badzioch, M. D., Minter, R., Hamoudi, R. A.,
Collins, N., Ardern-Jones, A., Dowe, A., Osborne, S., Kelly, J., Shearer, R.,
Easton, D. F., Saunders, G. F., Dearnaley, D. P., Eeles, R. A. (1999). "Androgen receptor polymorphisms: association with prostate
cancer risk, relapse and overall survival", International Journal of
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17. Mao, X., Barfoot, R., Hamoudi, R. A.,
Easton, D. F., Flanagan, A. M., Stratton, M. R. (1999). "Allelotype
of uterine leiomyomas", Cancer Genetics Cytogenetics, vol. 114, no.
2, pp. 89-95. Click
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16. Smedley, D., Hamoudi, R. A., Lu, Y. J.,
Cooper, C., Shipley, J. (1999). "Cloning and mapping of
members of the MYM family", Genomics, vol. 60, no. 2, pp. 244-247.
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here to view full article in pdf
15. Tomlinson, I., Rahman, N., Frayling, I.,
Mangion, J., Barfoot, R., Hamoudi, R. A., Seal, S., Northover, J.,
Thomas, H. J., Neale, K., Hodgson, S., Talbot, I., Houlston, R., Stratton, M.
R. (1999). "Inherited susceptibility to colorectal
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14. Willis, T. G., Jadayel, D. M., Du, M. Q.,
Peng, H., Perry, A. R., Abdul-Rauf, M., Price, H., Karran, L., Majekodunmi, O.,
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of MALT B cell lymphoma and mutated in multiple tumor types", Cell,
vol. 96, no. 1, pp. 35-45. Click
here to view full article in pdf
13. Eeles, R. A., Durocher, F., Edwards, S.,
Teare, D., Badzioch, M., Hamoudi, R. A., Gill, S., Biggs, P., Dearnaley,
D., Ardern-Jones, A., Dowe, A., Shearer, R., McLennan, D. L., Norman, R. L.,
Ghadirian, P., Aprikian, A., Ford, D., Amos, C., King, T. M., Labrie, F.,
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analysis of chromosome 1q markers in 136 prostate cancer families. The
Cancer Research Campaign/British Prostate Group U.K. Familial Prostate Cancer
Study Collaborators", American Journal of Human Genetics, vol. 62,
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here to view full article in pdf
12. Mao,
X., Barfoot, R., Hamoudi, R. A., Noble, M. (1998). "Alleletyping of
an oligodendrocyte-type-2 astrocyte lineage derive from a human glioblastoma
multiforme", Journal of Neurooncology, vol. 40, no. 3, pp. 243-250.
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here to view full article in pdf
11. Smedley, D., Hamoudi, R. A., Clark, J.,
Warren, W., Abdul-Rauf, M., Somers, G., Venter, D., Fagan, K., Cooper, C.,
Shipley, J. (1998). "The t(8;13)(p11;q11-12)
rearrangement associated with an atypical myeloproliferative disorder fuses the
fibroblast growth factor receptor 1 gene to a novel gene RAMP", Human
Molecular Genetics, vol. 7, no. 4, pp. 637-642. Click
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10. Bignell, G. R., Canzian, F., Shayeghi, M.,
Stark, M., Shugart, Y. Y., Biggs, P., Mangion, J., Hamoudi, R. A.,
Rosenblatt, J., Buu, P., Sun, S., Stoffer, S. S., Goldgar, D. E., Romeo, G.,
Houlston, R. S., Narod, S. A., Stratton, M. R., Foulkes, W. D. (1997).
"Familial nontoxic multinodular thyroid goiter locus maps to chromosome
14q but does not account for familial nonmedullary thyroid cancer", American
Journal of Human Genetics, vol. 61, no. 5, pp. 1123-1130. Click
here to view full article in pdf
9. Clark, J., Lu, Y. J., Sidhar, S. K., Parker,
C., Gill, S., Smedley, D., Hamoudi, R. A., Linehan, W. M., Shipley, J.,
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PSF and NonO (p54nrb) to the TFE3 gene in papillary renal cell carcinoma",
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here to view full article in pdf
8. Edwards, S. M., Dearnaley, D. P.,
Ardern-Jones, A., Hamoudi, R. A., Easton, D. F., Ford, D., Shearer, R.,
Dowe, A., Eeles, R. A. (1997). "No germline mutations in the dimerization
domain of MXI1 in prostate cancer clusters. The CRC/BPG UK
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here to view full article in pdf
7. Lens, D., De Schouwer, P. J., Hamoudi, R. A., Abdul-Rauf, M., Farahat, N., Matutes, E., Crook, T., Dyer, M. J., Catovsky, D. (1997). "p53 abnormalities in B-cell prolymphocytic leukemia", Blood, vol. 89, no. 6, pp. 2015-2023. Click here to view full article in pdf
6. Lens, D., Dyer, M. J., Garcia-Marco, J. M., De
Schouwer, P. J., Hamoudi, R. A., Jones, D., Farahat, N., Matutes, E.,
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are associated with excess of prolymphocytes and poor prognosis", British
Journal of Haematology, vol. 99, no. 4, pp. 848-857. Click
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5. Lakhani, S. R., Slack, D. N., Hamoudi, R.
A., Collins, N., Stratton, M. R., Sloane, J. P. (1996). "Detection of
allelic imbalance indicates that a proportion of mammary hyperplasia of usual
type are clonal, neoplastic proliferations", Journal of Laboratory
Investigation, vol. 74, no. 1, pp. 129-135. Click
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Phelan, C. M., Cochran, C., Gumbs, C., Seal, S., Barfoot, R., Collins, N.,
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breast and ovarian cancers", Nature Genetics, vol. 13, no. 2, pp.
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3. Sidhar, S. K., Clark, J., Gill, S., Hamoudi,
R. A., Crew, A. J., Gwilliam, R., Ross, M., Linehan, W. M., Birdsall, S.,
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translocation in papillary renal cell carcinoma fuses a novel gene PRCC to the
TFE3 transcription factor gene", Human Molecular Genetics, vol. 5,
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2. Gayther, S. A., Warren, W., Mazoyer, S.,
Russell, P. A., Harrington, P. A., Chiano, M., Seal, S., Hamoudi, R. A.,
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genotype-phenotype correlation", Nature Genetics, vol. 11, no. 4,
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1. Wooster, R.,
Bignell, G., Lancaster, J., Swift, S., Seal, S., Mangion, J., Collins, N.,
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S., Rice, C., Biggs, P., Hashim, Y., Smith, A., Connor, F., Arason, A.,
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